Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932351.1_cds_XP_016478877.1_70478
CDS Infomation

[gene=LOC107800242] [db_xref=GeneID:107800242] [protein=UPF0061 protein azo1574-like] [protein_id=XP_016478877.1] [location=join(12734..13063,14310..14419,14503..14559,14641..14940,15285..15532,16186..16492,16588..16861,17741..17995)] [gbkey=CDS]
Sequence

ATGCAAATGCTTTCTCGCATTTCAGCTTCATCCACCGCCCTCTTCCACCTCCGTTCTTCT
CTTCTCCGACCCAGATTCTATTTTTCCCCAAACAACCCCTTTTCGTTCCCAATTCAACCC
CATCTCCGCCGTCCATTGTTTTCTTCATCCATGGACTCAGCTACTGCTGCCACCGTTGAT
TCAGTTGCTGACAATTTCAAGAACCAAAGTTTAGAAAATAATGATAGCAGTAATGACAAA
CGTTTGTTGAAACTTGAAGAGCTTAATTGGGATCATTCTTTTGTTCGTGAACTTCCTTCT
GATTCAAGAACCGATACCATCCCAAGAGAGGTATTGCATGCTTGCTATACAAAAGTGTTG
CCTTCTGTAGAGGTGGAGAATCCCCAGCTCGTTGTGTGGTCAGAATCAGTAGCAGAGCTA
CTTGAGTTGGATCCTAAAGAATTTGAGAGGCCTGATTTTCCACTTCTGCTCTCAGGGGCA
TCACCTTTAGTGGGAGCTGTGCCTTATGCCCAGAACTATGGAGGACATCAGTTTGGGACG
TGGGCTGGTCAGCTAGGTGATGGTCGAGCAATAACACTTGGAGAGGTTTTGAATTCAAAA
TCCGAAAGGTGGGAACTGCAGCTAAAGGGTGCTGGGAAGACCCCATATAGTCGTTTTGCT
GATGGTCTTGCAGTGCTTCGGAGCAGTATTCGGGAATTCCTCTGCAGTGAAGCAATGCAC
AGTCTTGGAATCCCAACTACAAGAGCACTCTGTCTTGTAACAACAGGAAAAGATGTCACT
AGGGACATGTTTTATGATGGGAACCCGAAGGATGAGCCTGGTGCAATTGTCTGTAGAGTT
GCTCAATCCTTTTTGCGTTTTGGCTCTTACCAACTACATGCCTCTAGGGGTAAAAAGGAT
CTTGAGATTGTGCGTACTTTAGCAGACTACGCCATTAGACATCACTTCCCTCATCTAGAG
AACATGAGCAAGAGTGAAAGCATATCATTCAGCACAGGCGAAGAAGATGATTCGGCTGTG
GATTTAACTTCAAACAAATATGCAGCATGGGCTGTGGAAGTTGCTGAGCGGACTGCTTCT
ATGATTGCAAGGTGGCAAGGTGTTGGATTCACACACGGAGTGATGAATACTGATAACATG
AGTGTGTTAGGCCTCACCATTGATTATGGCCCTTTTGGATTCTTAGATGCTTTTGATCTG
AGTTTCACACCAAATACCACTGATCTACCTGGCAGAAGATACTGTTTCGCAAATCAGCCG
GATATAGGTTTATGGAATGTTGCTCAGTTTGCTAAAACTCTATCTACTGCTCAGTTGCTA
AATGATAAGGAGTCAAATTATGCCATGGAGAGGTACGGCATCAAATTTATGGACGACTAT
CAAGCAATCATGACGAAAAAGCTTGGTTTGGCTAAGTACAATAAACAAATGATTGGTGAT
CTACTTAAGAATATGGCTGTTGATAAAGTTGATTACACCAACTTCTTCCGATTGCTATCA
AACGTCAAGGCCGATCTTACAATTCCAGCAGACCAGTTACTGATTCCTCTGAAAGCTGCT
CTTTTGGATATTGGTATGGAACGCAAAGAAGCTTGGACAGGCTGGGTGAAATCCTACATA
CAGGAGCTGTCTACTAGCGGTGTATCAGACGAGGAGAGAAAAGCCTCCATGAATTCTGTA
AATCCAAAGTATGTCCTTAGAAACTACCTATGCCAAAGCGCAATTGATGCAGCTGAACAA
GGCGACTTTAGGGAGGTCCGACGACTACTGAAAGTTATGCAACGTCCGTTCGATGAACAA
CCTGGCATGGAGAAGTACGCGCGCCTACCTCCAGCCTGGGCTTATCGTCCAGGCGTAGGC
ATGCTTTCTTGTTCCTCATGA

Peptide Sequence

PEP ID

XP_016478877.1
PEP Infomation

PREDICTED: UPF0061 protein azo1574-like [Nicotiana tabacum]
Sequence

MQMLSRISASSTALFHLRSSLLRPRFYFSPNNPFSFPIQPHLRRPLFSSSMDSATAATVD
SVADNFKNQSLENNDSSNDKRLLKLEELNWDHSFVRELPSDSRTDTIPREVLHACYTKVL
PSVEVENPQLVVWSESVAELLELDPKEFERPDFPLLLSGASPLVGAVPYAQNYGGHQFGT
WAGQLGDGRAITLGEVLNSKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMH
SLGIPTTRALCLVTTGKDVTRDMFYDGNPKDEPGAIVCRVAQSFLRFGSYQLHASRGKKD
LEIVRTLADYAIRHHFPHLENMSKSESISFSTGEEDDSAVDLTSNKYAAWAVEVAERTAS
MIARWQGVGFTHGVMNTDNMSVLGLTIDYGPFGFLDAFDLSFTPNTTDLPGRRYCFANQP
DIGLWNVAQFAKTLSTAQLLNDKESNYAMERYGIKFMDDYQAIMTKKLGLAKYNKQMIGD
LLKNMAVDKVDYTNFFRLLSNVKADLTIPADQLLIPLKAALLDIGMERKEAWTGWVKSYI
QELSTSGVSDEERKASMNSVNPKYVLRNYLCQSAIDAAEQGDFREVRRLLKVMQRPFDEQ
PGMEKYARLPPAWAYRPGVGMLSCSS

Transcript Sequence

Gene sequence data has not been registered.